Flattening The Child Groups
Control the groups by moving all sub-groups content into their parent group

The Problem
Figma does not have the ability to truly merge shapes. When we flatten multiple shapes into one (cmd + opt + o), visually in Figma it look merges, but the SVG code will still spits seperate paths. When this happen the generated SVG will be wrapped in a group to "represent" the "merges". This extra group that we want to eliminates.
The Solution with SVG Toolbox
SVG Toolbox's Flatten Group "Sub-groups Only" feature helps us to eliminate this issue. It will detect any sub-groups and flatten them into its parent group. It will mantain any group that are direct descendants of main <svg>, but group/groups inside a group that is not direct descendant of main <svg> will be flattened. The process is recursive, so it will flatten all sub-groups until it reaches the deepest level.
Take a look at this example.
<svg
id="Logo"
viewBox="0 0 240 49"
xmlns="http://www.w3.org/2000/svg"
fill="none">
<g id="logomark">
<path fill="#6BDA0A" d="M23.6322..." />
</g>
<g id="logotype">
<g id="Vector_2">
<path fill="#ffffff" d="M110.599..." />
...
</g>
</g>
</svg>
Notice the <g id="Vector_2"> group inside <g id="logotype">, this group is not visually exist in Figma. It's a way Figma deal with visually merged shapes. By activating Flatten Group "Sub-groups Only", it will remove this sub-group, and move all the content to the parent group. This is the result:
<svg
id="Logo"
viewBox="0 0 240 49"
xmlns="http://www.w3.org/2000/svg"
fill="none">
<g id="logomark">
<path fill="#6BDA0A" d="M23.6322..." />
</g>
<g id="logotype">
<path fill="#ffffff" d="M110.599..." />
...
</g>
</svg>